• Complex bioinformatics tools made easily accessible
• Auto generate your workflow based on your experimental setup
• From raw data to identification
• Full support for most popular analytical setups including LC-MS/MS (DDA and DIA), GC/EI-MS, MS Imaging, and IMS

• Our non-target screening tool to find previously unknown compounds
• Perform ion identity and feature based molecular networking in mzmine
• Direct interaction between networks, feature table, and annotation views for rapid discovery
• Use DreaMS or MS2Deepscore, deep learning models for molecular networking

• Instant results at a glance
• Find significant features within seconds
• New interactive statistics dashboard directly linked to the feature table
• Use MS2 information to dive deep into formula prediction with the fragmentation dashboard

• Analyse your LC-MS2 DDA and DIA Metabolomics data
• Match millions of reference spectra against 1000s of samples within seconds
• Maximum control with advanced spectra merging options

• Analyse your GC/CI and GC/EI profiling data
• Fast GC-EI/MS spectral deconvolution and feature alignment
• Apply molecular networking to your GC-MS data
• Interactive spectral deconvolution result viewer

• Novel non-target imaging data analysis workflow
• Analyse all images in parallel
• Identify groups using the co-localization and molecular networking tools
• Co-localization analysis and results viewer
• Deep dive into your imaging raw data. You have access to each pixel’s raw data

• Rule-based lipid annotations, respecting structural depth and shorthand notation as recommended by the Lipidomics Standard Initiative
• Create your own custom lipid classes and fragmentation rules
• Quality control tools including Kendrick Mass Defect (KMD) plots, equivalent carbon number plots, and annotated MS2 spectra.

• LC or MALDI, we have a workflow to resolve complex polymer distributions
• Automatic repeating unit suggestion
• Advanced polymer decoding tools including charge and divisor dependent Kendrick Mass Defect (KMD) and Remainder of Kendrick Mass (RKM) plot

Webinar series

You are new to mzmine and want to see it in action? Have a look at our latest video tutorials and webinars to learn more about LC, GC, MALDI, and IMS data processing.